Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX99532.1Zinc ribbon domain protein; KEGG: rba:RB6605 1.7e-14 phospholipase C-beta-2; Psort location: Cytoplasmic, score: 8.96. (274 aa)    
Predicted Functional Partners:
EKX99531.1
Dinuclear metal center protein, YbgI family; KEGG: hip:CGSHiEE_02770 0.00011 seryl-tRNA synthetase; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.935
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
  0.705
EKY00009.1
Outer membrane protein, OMP85 family; KEGG: apb:SAR116_0511 7.4e-16 surface antigen D15 K07277; Psort location: OuterMembrane, score: 10.00.
  
     0.668
EKX98348.1
Signal peptidase I; KEGG: pmz:HMPREF0659_A5068 3.9e-182 lepB; signal peptidase I K03100; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the peptidase S26 family.
  
     0.654
EKX98785.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
  
     0.650
EKY01584.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.620
EKX99867.1
Permease, YjgP/YjgQ family; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.614
EKY03892.1
Hypothetical protein; KEGG: tte:TTE1510 7.1e-05 rpoZ; DNA-directed RNA polymerase subunit omega K03060.
 
     0.572
EKY03811.1
Peptidase, M56 family; KEGG: scl:sce7487 9.4e-07 ftsI3; penicillin-binding transpeptidase; Psort location: CytoplasmicMembrane, score: 10.00.
    
  0.544
EKY02904.1
Efflux ABC transporter, permease protein; KEGG: apb:SAR116_0522 1.9e-19 ABC-type transport system, permease component K09808; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.535
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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