STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX99535.1Sodium bile acid symporter family protein; Psort location: CytoplasmicMembrane, score: 10.00. (319 aa)    
Predicted Functional Partners:
EKY02968.1
KEGG: pru:PRU_1171 8.1e-111 tyrA; prephenate dehydrogenase; K04092 chorismate mutase K04517; Psort location: Cytoplasmic, score: 8.96.
  
     0.710
EKX98594.1
Hypothetical protein.
  
     0.698
EKX99534.1
DnaJ domain protein; KEGG: tgo:TGME49_017710 0.00023 DnaJ domain-containing protein; Psort location: CytoplasmicMembrane, score: 7.88.
       0.693
EKX99536.1
KEGG: abu:Abu_1717 0.00065 hsdM; type I restriction-modification system, M subunit, putative.
  
    0.678
EKX98342.1
Hypothetical protein.
  
     0.663
EKY02012.1
Hypothetical protein.
  
     0.619
EKX99833.1
Sporulation and cell division repeat protein; KEGG: bha:BH1294 0.0032 cwlC; N-acetylmuramoyl-L-alanine amidase (sporulation mother cell wall hydrolase) K01448; Psort location: Periplasmic, score: 9.83.
  
     0.598
EKX96443.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.593
EKX98295.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
  
     0.577
EKX96874.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.567
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.