| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EKX99329.1 | dnaJ | HMPREF9151_01756 | HMPREF9151_01754 | ABC transporter, ATP-binding protein; KEGG: ljf:FI9785_853 1.8e-154 ABC transporter ATPase component; Psort location: Cytoplasmic, score: 9.97. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.714 |
| EKX99329.1 | rplC | HMPREF9151_01756 | HMPREF9151_02157 | ABC transporter, ATP-binding protein; KEGG: ljf:FI9785_853 1.8e-154 ABC transporter ATPase component; Psort location: Cytoplasmic, score: 9.97. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.704 |
| EKX99329.1 | rplD | HMPREF9151_01756 | HMPREF9151_02156 | ABC transporter, ATP-binding protein; KEGG: ljf:FI9785_853 1.8e-154 ABC transporter ATPase component; Psort location: Cytoplasmic, score: 9.97. | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.708 |
| EKX99329.1 | rplT | HMPREF9151_01756 | HMPREF9151_01741 | ABC transporter, ATP-binding protein; KEGG: ljf:FI9785_853 1.8e-154 ABC transporter ATPase component; Psort location: Cytoplasmic, score: 9.97. | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.710 |
| EKX99329.1 | rplU | HMPREF9151_01756 | HMPREF9151_00616 | ABC transporter, ATP-binding protein; KEGG: ljf:FI9785_853 1.8e-154 ABC transporter ATPase component; Psort location: Cytoplasmic, score: 9.97. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.709 |
| EKX99329.1 | rpmD | HMPREF9151_01756 | HMPREF9151_02139 | ABC transporter, ATP-binding protein; KEGG: ljf:FI9785_853 1.8e-154 ABC transporter ATPase component; Psort location: Cytoplasmic, score: 9.97. | Ribosomal protein L30; KEGG: apb:SAR116_2409 4.8e-10 ribosomal protein L30 K02907; Psort location: Cytoplasmic, score: 9.26. | 0.706 |
| EKX99329.1 | rpsC | HMPREF9151_01756 | HMPREF9151_02151 | ABC transporter, ATP-binding protein; KEGG: ljf:FI9785_853 1.8e-154 ABC transporter ATPase component; Psort location: Cytoplasmic, score: 9.97. | Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.709 |
| EKX99329.1 | rpsM | HMPREF9151_01756 | HMPREF9151_02133 | ABC transporter, ATP-binding protein; KEGG: ljf:FI9785_853 1.8e-154 ABC transporter ATPase component; Psort location: Cytoplasmic, score: 9.97. | 30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.728 |
| EKX99329.1 | rpsO | HMPREF9151_01756 | HMPREF9151_01173 | ABC transporter, ATP-binding protein; KEGG: ljf:FI9785_853 1.8e-154 ABC transporter ATPase component; Psort location: Cytoplasmic, score: 9.97. | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.707 |
| EKX99329.1 | rpsS | HMPREF9151_01756 | HMPREF9151_02153 | ABC transporter, ATP-binding protein; KEGG: ljf:FI9785_853 1.8e-154 ABC transporter ATPase component; Psort location: Cytoplasmic, score: 9.97. | Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.704 |
| dnaJ | EKX99329.1 | HMPREF9151_01754 | HMPREF9151_01756 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | ABC transporter, ATP-binding protein; KEGG: ljf:FI9785_853 1.8e-154 ABC transporter ATPase component; Psort location: Cytoplasmic, score: 9.97. | 0.714 |
| dnaJ | rplC | HMPREF9151_01754 | HMPREF9151_02157 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.677 |
| dnaJ | rplU | HMPREF9151_01754 | HMPREF9151_00616 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.618 |
| dnaJ | rpsM | HMPREF9151_01754 | HMPREF9151_02133 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.601 |
| dnaJ | rpsO | HMPREF9151_01754 | HMPREF9151_01173 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.543 |
| rplC | EKX99329.1 | HMPREF9151_02157 | HMPREF9151_01756 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | ABC transporter, ATP-binding protein; KEGG: ljf:FI9785_853 1.8e-154 ABC transporter ATPase component; Psort location: Cytoplasmic, score: 9.97. | 0.704 |
| rplC | dnaJ | HMPREF9151_02157 | HMPREF9151_01754 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.677 |
| rplC | rplD | HMPREF9151_02157 | HMPREF9151_02156 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.999 |
| rplC | rplT | HMPREF9151_02157 | HMPREF9151_01741 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.992 |
| rplC | rplU | HMPREF9151_02157 | HMPREF9151_00616 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.989 |
