Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX99194.1Hypothetical protein. (652 aa)    
Predicted Functional Partners:
EKY03579.1
Glycosyl hydrolase family 2, sugar binding domain protein.
  
     0.673
EKX97269.1
Alpha-L-rhamnosidase protein.
  
  
  0.630
EKX97245.1
L-rhamnose-proton symport protein.
  
     0.595
EKY04319.1
Hepatitis C virus non-structural protein E2/NS1; KEGG: lpl:lp_3471 1.6e-18 ram1; alpha-L-rhamnosidase (putative) K05989.
  
     0.586
EKY00753.1
Arylsulfatase; KEGG: ypi:YpsIP31758_0945 9.7e-76 sulfatase; Psort location: Cytoplasmic, score: 9.26.
  
  
  0.517
EKX96439.1
Arylsulfatase; KEGG: ecf:ECH74115_5415 4.7e-31 hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.465
EKY03584.1
Hypothetical protein.
  
     0.428
EKY04055.1
Glycosyl hydrolase, family 88; KEGG: rle:pRL120662 7.4e-46 ugl; putative unsaturated glucuronyl hydrolase; K01238; Psort location: Cytoplasmic, score: 9.26.
 
     0.425
EKY01114.1
Acyltransferase; KEGG: ddd:Dda3937_04140 1.2e-14 integral membrane protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.422
EKY03935.1
Hypothetical protein.
 
     0.400
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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