STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX99196.1Peptidase, S9A/B/C family, catalytic domain protein; KEGG: pru:PRU_0634 1.1e-243 dipeptidyl-peptidase IV K01278. (722 aa)    
Predicted Functional Partners:
EKX99197.1
Hypothetical protein; KEGG: rmr:Rmar_2469 2.0e-24 pectinesterase K01051.
       0.701
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
     
  0.562
EKX98593.1
KEGG: emi:Emin_0922 3.5e-39 amino acid/peptide transporter; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.543
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
     
  0.538
EKY01999.1
Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides.
  
     0.449
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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