STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX99211.1KEGG: shn:Shewana3_3590 1.3e-18 single-strand binding protein K03111; Psort location: Cytoplasmic, score: 9.97. (135 aa)    
Predicted Functional Partners:
EKY02326.1
KEGG: pru:PRU_1896 0. dnaE; DNA polymerase III subunit alpha K02337; Psort location: Cytoplasmic, score: 9.97.
    
 0.906
priA
Primosomal protein; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.
  
 
 
 0.875
rpsF
Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
  
  
 0.844
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
 
 0.804
EKY02854.1
Hypothetical protein.
   
 
 0.795
EKX99210.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.787
EKX99212.1
Gliding motility-associated protein GldE; KEGG: apb:SAR116_1911 6.1e-42 CBS domain protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.787
EKX99213.1
Hypothetical protein; KEGG: fps:FP0188 3.7e-12 sfp; phosphopantetheinyl transferase; Psort location: Cytoplasmic, score: 8.96.
  
    0.762
dnaX
DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
    
 
 0.753
EKX96217.1
Putative DNA polymerase III, delta' subunit; KEGG: pmz:HMPREF0659_A5422 9.6e-124 hypothetical protein; K02341 DNA polymerase III subunit delta'; Psort location: Cytoplasmic, score: 9.97.
    
 
 0.753
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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