Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX99218.1Hypothetical protein. (802 aa)    
Predicted Functional Partners:
EKX99219.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
       0.794
EKX99217.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.86.
       0.784
EKX99216.1
Hypothetical protein; KEGG: edi:EDI_024060 6.8e-15 trichohyalin K13173; Psort location: Cytoplasmic, score: 9.94.
       0.774
EKX99215.1
Tetratricopeptide repeat protein; KEGG: tet:TTHERM_01109810 9.9e-07 Tubulin-tyrosine ligase family protein.
       0.702
EKY03811.1
Peptidase, M56 family; KEGG: scl:sce7487 9.4e-07 ftsI3; penicillin-binding transpeptidase; Psort location: CytoplasmicMembrane, score: 10.00.
   
  0.464
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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