Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EKX98745.1Transglycosylase; KEGG: pmz:HMPREF0659_A5825 3.8e-294 transglycosylase; K05366 penicillin-binding protein 1A; Psort location: CytoplasmicMembrane, score: 9.82. (826 aa)    
Predicted Functional Partners:
EKX96873.1
KEGG: pmz:HMPREF0659_A5215 3.7e-257 penicillin-binding protein, transpeptidase domain protein; K03587 cell division protein FtsI (penicillin-binding protein 3); Psort location: CytoplasmicMembrane, score: 9.82.
  
 
 0.941
EKY00104.1
Putative penicillin-binding protein 2; KEGG: chu:CHU_3305 9.4e-133 mrdA; peptidoglycan glycosyltransferase K05515; Psort location: CytoplasmicMembrane, score: 9.82.
  
 
 0.939
EKX99729.1
Transglycosylase; KEGG: pru:PRU_0638 0. penicillin-binding protein 1A; K05366 penicillin-binding protein 1A; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
0.883
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
  
  
 
0.873
EKX97341.1
KEGG: pru:PRU_1998 6.8e-107 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259; Psort location: Periplasmic, score: 9.76.
  
  
 0.868
miaA-2
tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.
       0.742
EKX96142.1
Peptidase, M23 family; KEGG: npu:Npun_F6078 9.9e-20 peptidase M23B; Psort location: OuterMembrane, score: 8.28.
 
  
 0.639
EKX98744.1
Tetratricopeptide repeat domain protein; KEGG: dre:326729 6.6e-45 pif1, cb934, fe11d03, wu:fe11d03, zgc:56161; PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) K01529; Psort location: Cytoplasmic, score: 8.96.
       0.634
EKX99499.1
KEGG: pru:PRU_0014 5.3e-139 transglycosylase SLT/LysM domain-containing protein; K08307 membrane-bound lytic murein transglycosylase D.
 
  
 0.627
EKY00983.1
Beta-lactamase; KEGG: srm:SRM_00449 4.0e-52 bglX; beta-N-acetylglucosaminidase; Psort location: CytoplasmicMembrane, score: 9.82.
   
 
 0.624
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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