Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EKX98758.1Tetratricopeptide repeat protein; KEGG: cag:Cagg_3772 0.0011 serine/threonine protein kinase with TPR repeats; K08884 serine/threonine protein kinase, bacterial. (472 aa)    
Predicted Functional Partners:
EKX98757.1
Hypothetical protein; KEGG: sab:SAB1245c 2.7e-14 phosphate-binding lipoprotein K02040.
 
    0.911
EKX98756.1
TonB-dependent receptor; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
    0.910
EKX98755.1
Hypothetical protein.
 
    0.905
EKX98754.1
Hypothetical protein.
 
    0.897
EKX98753.1
Transporter, MotA/TolQ/ExbB proton channel family protein; KEGG: apb:SAR116_2296 7.9e-07 biopolymer transport protein K03562; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.841
EKY02068.1
TonB-dependent receptor; Psort location: OuterMembrane, score: 9.52.
  
     0.716
EKY01582.1
Hypothetical protein.
  
     0.686
EKY02333.1
Tetratricopeptide repeat protein; KEGG: bcy:Bcer98_3248 0.0037 pheT; phenylalanyl-tRNA synthetase subunit beta K01890.
  
  
  0.622
EKY01624.1
Hypothetical protein.
  
     0.616
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.598
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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