Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX98766.1Hypothetical protein; KEGG: scb:SCAB_3481 2.7e-21 putative levanase; K01212 levanase. (989 aa)    
Predicted Functional Partners:
EKX98767.1
Hypothetical protein.
 
     0.914
EKX98765.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.86.
 
     0.850
EKY03286.1
Hypothetical protein.
  
     0.762
EKX98760.1
Hypothetical protein.
 
     0.670
EKY00574.1
Glycosyl hydrolase family 2, sugar binding domain protein; Belongs to the glycosyl hydrolase 2 family.
  
  
  0.562
EKY03579.1
Glycosyl hydrolase family 2, sugar binding domain protein.
  
     0.492
EKX98764.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.482
EKY04319.1
Hepatitis C virus non-structural protein E2/NS1; KEGG: lpl:lp_3471 1.6e-18 ram1; alpha-L-rhamnosidase (putative) K05989.
  
   
 0.474
EKX97269.1
Alpha-L-rhamnosidase protein.
  
  
  0.470
EKY04281.1
Hypothetical protein; KEGG: nwi:Nwi_0782 1.1e-08 integrase, catalytic region K00986.
  
     0.465
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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