Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKX98786.1OmpA family protein; KEGG: bte:BTH_I0426 0.00015 cytochrome c oxidase, subunit II; K02275 cytochrome c oxidase subunit II; Psort location: OuterMembrane, score: 10.00. (392 aa)    
Predicted Functional Partners:
EKX96154.1
Hypothetical protein.
  
   0.660
EKY00497.1
Hypothetical protein.
  
    0.641
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.554
mutL
DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.
       0.553
EKX99541.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
  
     0.546
EKY00571.1
Hypothetical protein.
  
     0.532
EKX96096.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.530
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
  
 
  0.526
EKY02040.1
Hypothetical protein.
  
     0.520
EKY03933.1
Hypothetical protein; KEGG: ddd:Dda3937_01250 3.1e-07 yqiA; esterase K07000; Psort location: Cytoplasmic, score: 8.96.
  
     0.514
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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