STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX98572.1KEGG: bth:BT_3766 5.4e-98 rhamnulose-1-phosphate aldolase K01629; Psort location: Cytoplasmic, score: 9.97. (269 aa)    
Predicted Functional Partners:
EKX97247.1
Putative rhamnulokinase.
 
 
 0.974
rhaA
Putative L-rhamnose isomerase; Belongs to the rhamnose isomerase family.
 
  
 0.866
EKY01124.1
KEGG: pmz:HMPREF0659_A5379 6.4e-150 fba; fructose-1,6-bisphosphate aldolase, class II K01624; Psort location: Cytoplasmic, score: 9.97.
    
 0.848
tpiA
Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
    
 0.637
EKY03608.1
KEGG: bvu:BVU_3516 1.6e-160 fructose-bisphosphate aldolase K01623; Psort location: Cytoplasmic, score: 8.96.
     
  0.592
araB
Ribulokinase; KEGG: tcr:508625.150 9.5e-172 L-ribulokinase; K00853 L-ribulokinase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.581
dxs
1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.
       0.533
EKX98574.1
Potassium transporter peripheral membrane component; KEGG: apb:SAR116_0219 7.4e-46 K+ transport systems, NAD-binding component K03499; Psort location: CytoplasmicMembrane, score: 7.88.
       0.533
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
  
 
 0.479
EKX97245.1
L-rhamnose-proton symport protein.
 
  
 0.471
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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