Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EKX98590.1Hypothetical protein. (55 aa)    
Predicted Functional Partners:
EKX98589.1
KEGG: pmz:HMPREF0659_A6944 0. homoserine dehydrogenase K12524; Psort location: CytoplasmicMembrane, score: 8.46.
       0.566
EKX98586.1
Tetratricopeptide repeat protein; KEGG: ddi:DDB_G0283663 0.0035 ppiD; cyclophilin-type peptidylprolyl cis-trans isomerase; K05864 peptidyl-prolyl isomerase D (cyclophilin D).
       0.548
EKX98587.1
Threonine synthase; KEGG: bvu:BVU_2052 2.1e-160 threonine synthase K01733; Psort location: Cytoplasmic, score: 9.97.
       0.548
EKX98588.1
KEGG: pru:PRU_1017 3.2e-148 putative homoserine kinase; K01834 phosphoglycerate mutase; Psort location: Cytoplasmic, score: 8.96.
       0.548
EKX98591.1
Oxidoreductase, FAD-dependent family protein; KEGG: gox:GOX1630 1.9e-56 putative oxidoreductase K00100; Psort location: Cytoplasmic, score: 8.96.
       0.498
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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