Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX98595.1KEGG: gfo:GFO_2227 9.4e-11 LysM domain-containing proteins K01423. (452 aa)    
Predicted Functional Partners:
EKX98594.1
Hypothetical protein.
 
     0.927
EKY02332.1
Hypothetical protein.
  
     0.761
EKY03886.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
  
     0.746
EKY03874.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.735
EKY02704.1
Hypothetical protein.
  
    0.730
EKX99649.1
Hypothetical protein.
  
     0.730
EKY02333.1
Tetratricopeptide repeat protein; KEGG: bcy:Bcer98_3248 0.0037 pheT; phenylalanyl-tRNA synthetase subunit beta K01890.
  
     0.728
EKY03427.1
Hypothetical protein.
  
     0.711
EKY04297.1
Hypothetical protein.
  
    0.681
EKX99541.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
  
    0.680
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.