Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EKX98496.1Transporter, DASS family; Psort location: CytoplasmicMembrane, score: 10.00. (487 aa)    
Predicted Functional Partners:
EKY01423.1
Hypothetical protein.
  
     0.585
EKY01425.1
Hypothetical protein; KEGG: apb:SAR116_0292 6.7e-41 exporter of the RND superfamily; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.573
EKY01424.1
Hypothetical protein; KEGG: apb:SAR116_0293 5.8e-30 hyopothetical protein.
  
     0.498
EKY03630.1
O-methyltransferase; KEGG: pmz:HMPREF0659_A6336 1.4e-83 O-methyltransferase; Psort location: Cytoplasmic, score: 9.97.
 
      0.482
EKY02824.1
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.403
EKY03548.1
Sodium:neurotransmitter symporter family protein; KEGG: hip:CGSHiEE_08435 2.0e-45 dihydroxy-acid dehydratase K03308; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.400
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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