STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX98502.1Polysaccharide biosynthesis protein; KEGG: cco:CCC13826_0528 6.6e-05 cytosol aminopeptidase; Psort location: CytoplasmicMembrane, score: 10.00. (498 aa)    
Predicted Functional Partners:
EKX98503.1
KEGG: pmz:HMPREF0659_A7272 2.9e-83 glycosyltransferase, group 2 family protein; Psort location: CytoplasmicMembrane, score: 7.88.
  
    0.828
EKX98499.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
    0.794
EKY02692.1
WxcM-like protein.
 
    0.756
EKY02693.1
Hypothetical protein.
 
     0.737
EKY02694.1
Putative erythromycin biosynthesis sensory transduction protein EryC1; KEGG: sdl:Sdel_1781 1.5e-104 glutamine--scyllo-inositol transaminase; Psort location: Cytoplasmic, score: 9.97; Belongs to the DegT/DnrJ/EryC1 family.
 
    0.590
EKX98501.1
Glycosyltransferase, group 2 family protein; KEGG: bde:BDP_1821 1.1e-33 glycosyl transferase family 2; Psort location: CytoplasmicMembrane, score: 7.88.
  
    0.564
EKY02691.1
KEGG: pmz:HMPREF0659_A6853 1.3e-176 rfbB; dTDP-glucose 4,6-dehydratase K01710; Psort location: Cytoplasmic, score: 9.97; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.529
EKY00064.1
Nucleotide sugar dehydrogenase; KEGG: pru:PRU_1313 1.2e-189 UDP-glucose 6-dehydrogenase K00012.
  
  
 0.510
EKY00065.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.510
EKX96127.1
UDP-galactopyranose mutase; KEGG: bfs:BF1370 6.8e-146 wcfM; putative LPS biosynthesis related UDP-galactopyranose mutase; K01854 UDP-galactopyranose mutase; Psort location: Cytoplasmic, score: 8.96.
  
    0.502
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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