Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKX98441.1MATE efflux family protein; KEGG: rcp:RCAP_rcc02680 4.3e-12 mdtK; multidrug resistance protein MdtK K03327; Psort location: CytoplasmicMembrane, score: 10.00. (444 aa)    
Predicted Functional Partners:
EKX98440.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.710
EKX98439.1
Putative ferrichrome ABC transporter, ATP-binding protein FhuC; KEGG: bfs:BF2248 6.2e-65 putative iron transport related ATP-binding protein; K02013 iron complex transport system ATP-binding protein.
  
    0.477
EKX98444.1
KEGG: cpb:Cphamn1_0484 1.0e-30 HAD-superfamily hydrolase, subfamily IA, variant 1; K01091 phosphoglycolate phosphatase; Psort location: Cytoplasmic, score: 9.97.
   
   0.457
EKX98443.1
PAP2 family protein; KEGG: nca:Noca_2059 0.0019 undecaprenyl-diphosphatase K06153; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.452
EKX98442.1
NAD dependent epimerase/dehydratase family protein; KEGG: bfs:BF4355 2.8e-101 putative UDP-glucose 4-epimerase K01784; Psort location: Cytoplasmic, score: 8.96.
  
    0.449
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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