Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX98443.1PAP2 family protein; KEGG: nca:Noca_2059 0.0019 undecaprenyl-diphosphatase K06153; Psort location: CytoplasmicMembrane, score: 10.00. (327 aa)    
Predicted Functional Partners:
EKX98442.1
NAD dependent epimerase/dehydratase family protein; KEGG: bfs:BF4355 2.8e-101 putative UDP-glucose 4-epimerase K01784; Psort location: Cytoplasmic, score: 8.96.
 
     0.853
EKY01821.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
  
     0.748
EKY02701.1
Hypothetical protein; KEGG: pdi:BDI_0184 2.1e-87 peptidyl-prolyl cis-trans isomerase; K03770 peptidyl-prolyl cis-trans isomerase D.
  
     0.746
EKX99649.1
Hypothetical protein.
  
     0.744
EKY02332.1
Hypothetical protein.
  
     0.738
EKX98444.1
KEGG: cpb:Cphamn1_0484 1.0e-30 HAD-superfamily hydrolase, subfamily IA, variant 1; K01091 phosphoglycolate phosphatase; Psort location: Cytoplasmic, score: 9.97.
       0.732
EKY02029.1
Hypothetical protein.
  
     0.709
EKY02053.1
Phosphate-selective porin O and P.
  
     0.703
EKX99726.1
Response regulator receiver domain protein; KEGG: ava:Ava_B0209 2.0e-06 two component LuxR family transcriptional regulator K02479; Psort location: Cytoplasmic, score: 8.96.
  
     0.698
EKY01217.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.695
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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