STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX98342.1Hypothetical protein. (406 aa)    
Predicted Functional Partners:
EKX98340.1
Hypothetical protein.
 
     0.954
EKX98341.1
Sigma-70 region 2; KEGG: reh:H16_A2563 2.4e-15 rpoE1; RNA polymerase sigma factor RpoE K03088; Psort location: Cytoplasmic, score: 9.97; Belongs to the sigma-70 factor family. ECF subfamily.
       0.825
EKX98295.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
  
     0.718
EKX96874.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.716
EKX99217.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.86.
  
     0.686
EKY02847.1
Putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase.
  
     0.683
EKY03886.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
  
     0.676
EKX99833.1
Sporulation and cell division repeat protein; KEGG: bha:BH1294 0.0032 cwlC; N-acetylmuramoyl-L-alanine amidase (sporulation mother cell wall hydrolase) K01448; Psort location: Periplasmic, score: 9.83.
  
     0.666
EKX99535.1
Sodium bile acid symporter family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.663
EKY02012.1
Hypothetical protein.
  
     0.662
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.