STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX98160.1Hypothetical protein; KEGG: chl:Chy400_1547 3.0e-05 CDP-alcohol phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Psort location: CytoplasmicMembrane, score: 9.82. (348 aa)    
Predicted Functional Partners:
EKX98161.1
HAD hydrolase, family IA, variant 1; KEGG: spq:SPAB_05736 7.2e-09 nucleotidase; K08723 5'-nucleotidase; Psort location: Cytoplasmic, score: 8.96.
 
  
  0.931
EKX98162.1
Hypothetical protein.
 
     0.864
EKY02779.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.829
EKY02780.1
Hypothetical protein; KEGG: hsl:OE1114F 6.7e-13 graD3; sugar nucleotidyltransferase K00973; Psort location: Cytoplasmic, score: 8.96.
 
    0.829
EKX99289.1
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 1.8e-16 fadD; long-chain-fatty-acid--CoA ligase K03743; Psort location: Cytoplasmic, score: 8.96; Belongs to the CinA family.
  
  
 0.814
EKY02669.1
Hypothetical protein.
  
     0.716
EKX98296.1
Gliding motility-associated protein GldN.
  
     0.711
EKX98297.1
Gliding motility-associated protein GldM.
  
     0.698
EKX98300.1
Bacteroidetes-specific putative membrane protein.
  
     0.689
EKY03263.1
Tetratricopeptide repeat protein.
  
 
   0.668
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.