Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX98162.1Hypothetical protein. (873 aa)    
Predicted Functional Partners:
EKX98160.1
Hypothetical protein; KEGG: chl:Chy400_1547 3.0e-05 CDP-alcohol phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.864
EKX98161.1
HAD hydrolase, family IA, variant 1; KEGG: spq:SPAB_05736 7.2e-09 nucleotidase; K08723 5'-nucleotidase; Psort location: Cytoplasmic, score: 8.96.
       0.825
EKY03811.1
Peptidase, M56 family; KEGG: scl:sce7487 9.4e-07 ftsI3; penicillin-binding transpeptidase; Psort location: CytoplasmicMembrane, score: 10.00.
  
  0.637
EKY02645.1
DNA-binding protein HU; KEGG: sce:YNL250W 0.0055 RAD50; Rad50p K10866; Psort location: Cytoplasmic, score: 8.96; overlaps another CDS with the same product name; Belongs to the bacterial histone-like protein family.
  
     0.628
EKY04297.1
Hypothetical protein.
  
     0.627
EKY01582.1
Hypothetical protein.
  
     0.627
EKY03886.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
  
     0.621
EKX99541.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
  
     0.614
EKY02705.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
  
     0.608
EKY02012.1
Hypothetical protein.
  
     0.597
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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