STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX98129.1Resolvase protein; Psort location: Cytoplasmic, score: 8.96. (203 aa)    
Predicted Functional Partners:
EKX98159.1
Hypothetical protein; KEGG: hpa:HPAG1_1395 5.2e-40 type IIS restriction-modification protein K00571; Psort location: Cytoplasmic, score: 8.96.
 
     0.869
EKX98158.1
Hypothetical protein; KEGG: hpl:HPB8_11 4.3e-07 mod-1; adenine-specific DNA-methyltransferase.
  
     0.726
EKX98169.1
Hypothetical protein; KEGG: hpa:HPAG1_1395 3.0e-48 type IIS restriction-modification protein K00571; Psort location: Cytoplasmic, score: 8.96.
 
    0.709
EKX98168.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
    0.689
EKX98167.1
Helicase protein; KEGG: lsp:Bsph_0793 3.8e-17 ATP-dependent helicase YqhH; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.583
EKY00055.1
Putative membrane protein; KEGG: apb:SAR116_2175 8.8e-06 RarD protein, DMT superfamily transporter K05786; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.433
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.