Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX97898.1Hypothetical protein. (128 aa)    
Predicted Functional Partners:
EKX97930.1
Hypothetical protein; KEGG: app:CAP2UW1_3893 0.0013 non-specific serine/threonine protein kinase.
     0.985
EKX97966.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
     0.983
EKY03707.1
N-6 DNA Methylase; KEGG: bfs:BF1838 9.8e-08 hsdM; putative type I restriction enzyme methylase; K03427 type I restriction enzyme M protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.967
EKX97719.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.948
EKX98002.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.947
EKY03706.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.822
EKY04361.1
Conjugative transposon TraN protein.
 
   0.767
EKX97967.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.759
EKY02581.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
    0.757
EKY04364.1
Conjugative transposon protein TraQ family protein.
  
     0.737
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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