Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EKX97487.1Putative membrane protein; Psort location: CytoplasmicMembrane, score: 10.00. (307 aa)    
Predicted Functional Partners:
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
       0.771
EKX97489.1
ComEC/Rec2-like protein; KEGG: apb:SAR116_0501 6.8e-17 possible DNA uptake protein, ComEC K02238; Psort location: CytoplasmicMembrane, score: 10.00.
       0.732
EKX97490.1
Hypothetical protein.
       0.648
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
       0.623
EKX97298.1
Hypothetical protein.
  
     0.523
EKY02645.1
DNA-binding protein HU; KEGG: sce:YNL250W 0.0055 RAD50; Rad50p K10866; Psort location: Cytoplasmic, score: 8.96; overlaps another CDS with the same product name; Belongs to the bacterial histone-like protein family.
  
     0.493
EKY02842.1
TonB-dependent receptor.
  
     0.472
EKX95889.1
Hypothetical protein.
  
     0.460
EKY01582.1
Hypothetical protein.
  
     0.447
EKY04297.1
Hypothetical protein.
  
     0.419
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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