Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKX97489.1ComEC/Rec2-like protein; KEGG: apb:SAR116_0501 6.8e-17 possible DNA uptake protein, ComEC K02238; Psort location: CytoplasmicMembrane, score: 10.00. (523 aa)    
Predicted Functional Partners:
EKX96749.1
comF family protein; KEGG: chu:CHU_3495 6.6e-22 purF; amidophosphoribosyltransferase K00764; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.868
EKY01815.1
KEGG: apb:SAR116_0616 1.4e-33 DNA protecting protein DprA K04096; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.850
EKX98403.1
Mg chelatase-like protein; KEGG: chu:CHU_0354 1.7e-165 ch1I; magnesium chelatase, subunit ChlI K07391; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.796
EKX97490.1
Hypothetical protein.
       0.794
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
       0.781
EKX97487.1
Putative membrane protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.732
EKX99725.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: aci:ACIAD0595 3.8e-11 putative sensory transduction histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.553
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
       0.538
EKX96446.1
S23 ribosomal protein; KEGG: rrs:RoseRS_4428 1.1e-07 glutamine--scyllo-inositol transaminase; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.448
recA
RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
 
  
 0.443
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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