STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX97490.1Hypothetical protein. (447 aa)    
Predicted Functional Partners:
EKX97489.1
ComEC/Rec2-like protein; KEGG: apb:SAR116_0501 6.8e-17 possible DNA uptake protein, ComEC K02238; Psort location: CytoplasmicMembrane, score: 10.00.
       0.794
EKY03886.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
  
     0.754
EKY03427.1
Hypothetical protein.
  
     0.739
EKY00006.1
Hypothetical protein; Psort location: Extracellular, score: 9.64.
  
     0.739
EKX96443.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.727
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
       0.726
EKX98298.1
Gliding motility-associated protein GldL.
  
     0.705
EKX99874.1
PorT family protein.
  
     0.689
EKY02012.1
Hypothetical protein.
  
     0.683
EKX98296.1
Gliding motility-associated protein GldN.
  
     0.682
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.