STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX97492.1KEGG: pmz:HMPREF0659_A6683 6.2e-152 nspC; carboxynorspermidine decarboxylase; K13747 carboxynorspermidine decarboxylase; Psort location: Cytoplasmic, score: 8.96. (389 aa)    
Predicted Functional Partners:
EKX96052.1
Saccharopine dehydrogenase; KEGG: pmz:HMPREF0659_A5557 2.0e-201 lys1; saccharopine dehydrogenase; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.967
EKX98589.1
KEGG: pmz:HMPREF0659_A6944 0. homoserine dehydrogenase K12524; Psort location: CytoplasmicMembrane, score: 8.46.
  
 
 0.760
EKY03303.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
    
 0.730
EKX97493.1
Hypothetical protein; KEGG: pmz:HMPREF0659_A5801 1.2e-27 thiamine monophosphate synthase/TenI; K00788 thiamine-phosphate pyrophosphorylase.
     
 0.683
prs
Ribose-phosphate diphosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
  
    0.583
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
 
 0.455
hisI
phosphoribosyl-ATP diphosphatase; KEGG: bth:BT_1377 4.6e-76 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; K11755 phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase; Psort location: Cytoplasmic, score: 9.97; In the N-terminal section; belongs to the PRA-CH family.
  
  
 0.449
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
  
  
 0.442
EKX97491.1
Hypothetical protein.
       0.429
EKY00501.1
KEGG: pru:PRU_2199 3.7e-177 argG; argininosuccinate synthase K01940; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.422
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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