STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX97496.1Transporter, SSS family; KEGG: hiq:CGSHiGG_00405 1.1e-10 cytidine deaminase K11928; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (573 aa)    
Predicted Functional Partners:
EKX97497.1
KEGG: gfo:GFO_2145 3.1e-54 NUDIX family hydrolase K01529; Psort location: Cytoplasmic, score: 8.96.
  
    0.696
EKX97495.1
Putative aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
    0.669
EKX97498.1
KEGG: pru:PRU_0421 9.3e-94 putative L-ribulose-5-phosphate 4-epimerase; K01786 L-ribulose-5-phosphate 4-epimerase.
  
    0.606
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
  
    0.506
EKY00988.1
Hypothetical protein; KEGG: sli:Slin_6587 1.5e-38 heparan-alpha-glucosaminide N-acetyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.448
EKY03529.1
Transporter, SSS family; KEGG: apb:SAR116_0788 1.1e-05 Na+/solute symporter (Ssf family); Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.431
EKX97114.1
Hypothetical protein; KEGG: cja:CJA_0817 7.9e-97 agd97A; alpha-glucosidase, putative, adg97A.
  
     0.403
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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