STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX97526.1TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.52. (1176 aa)    
Predicted Functional Partners:
EKX97525.1
SusD family protein.
 
 
   0.922
EKX98762.1
SusD family protein.
  
 
   0.886
EKY03096.1
SusD family protein.
  
 
   0.815
EKY03587.1
SusD family protein; Psort location: Cytoplasmic, score: 8.96.
  
 
   0.802
EKY02987.1
SusD family protein.
  
 
   0.789
EKY03611.1
SusD family protein.
  
 
   0.748
EKY00755.1
SusD family protein.
  
 
   0.742
EKY03580.1
SusD family protein.
  
 
   0.721
EKX99827.1
SusD family protein.
  
 
   0.713
EKY03576.1
Hypothetical protein; Psort location: Extracellular, score: 9.64.
  
     0.700
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.