STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX97248.1Peptidase C10 family protein. (906 aa)    
Predicted Functional Partners:
EKY00806.1
Hypothetical protein.
  
     0.765
EKY02098.1
Radical SAM domain protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.743
EKY00497.1
Hypothetical protein.
  
     0.702
EKX98234.1
FG-GAP repeat protein; KEGG: npu:Npun_F1457 1.7e-05 putative outer membrane adhesin like proteiin; Psort location: OuterMembrane, score: 9.49.
  
   0.634
EKY02097.1
Oxidoreductase, NAD-binding domain protein; KEGG: sat:SYN_02682 5.0e-08 oxidoreductase K00100; Psort location: Cytoplasmic, score: 8.96.
  
     0.615
EKY02490.1
KEGG: npu:Npun_R5402 5.8e-06 FG-GAP repeat-containing protein; Psort location: OuterMembrane, score: 9.49.
  
   0.613
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
 0.596
EKX98230.1
Hypothetical protein.
  
   0.537
EKY00566.1
Fasciclin domain protein.
  
     0.522
EKX98236.1
YD repeat protein; Psort location: Extracellular, score: 9.64.
  
   0.522
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.