STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX97314.1Alpha-ribazole phosphatase. (190 aa)    
Predicted Functional Partners:
cobS
Cobalamin-5-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
 
 
 0.996
EKX97312.1
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
 
 
 0.991
EKX97311.1
Putative adenosylcobalamin biosynthesis protein CobU.
 
 
 0.956
EKX99509.1
KEGG: pmz:HMPREF0659_A5803 4.0e-141 putative D-lactate dehydrogenase; K03778 D-lactate dehydrogenase; Psort location: Cytoplasmic, score: 9.97; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.792
EKX97279.1
Phosphoserine phosphatase SerB.
    
 0.737
EKY02097.1
Oxidoreductase, NAD-binding domain protein; KEGG: sat:SYN_02682 5.0e-08 oxidoreductase K00100; Psort location: Cytoplasmic, score: 8.96.
    
 0.638
EKX97309.1
OmpA family protein.
       0.520
pgk
Phosphoglycerate kinase; KEGG: pmz:HMPREF0659_A6964 1.3e-183 pgk; phosphoglycerate kinase K00927; Psort location: Cytoplasmic, score: 9.97.
     
 0.512
eno
Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
     
 0.512
ilvD
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
    
  0.501
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.