Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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Textmining
[Homology]
Score
EKX97333.1TonB-dependent receptor; Psort location: OuterMembrane, score: 9.52. (845 aa)    
Predicted Functional Partners:
EKX97331.1
Hypothetical protein.
 
     0.954
EKY02995.1
Endonuclease/exonuclease/phosphatase family protein.
 
     0.823
EKX97330.1
Hypothetical protein; Psort location: Extracellular, score: 9.64.
       0.769
EKX99725.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: aci:ACIAD0595 3.8e-11 putative sensory transduction histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 10.00.
  
   
 0.681
rpmE2
Ribosomal protein L31; KEGG: apb:SAR116_2278 1.2e-06 ribosomal protein L31 K02909.
  
    0.599
EKY03640.1
Cyclic nucleotide-binding domain protein; KEGG: bbo:BBOV_I004690 0.0015 19.m02237; cGMP dependent protein kinase K07376; Psort location: Cytoplasmic, score: 8.96.
  
     0.592
EKX97332.1
Hypothetical protein.
       0.572
EKY02969.1
Endonuclease/exonuclease/phosphatase family protein; KEGG: bal:BACI_c11150 0.0014 endonuclease/exonuclease/phosphatase K07004; Psort location: Cytoplasmic, score: 8.96.
 
     0.562
EKX99726.1
Response regulator receiver domain protein; KEGG: ava:Ava_B0209 2.0e-06 two component LuxR family transcriptional regulator K02479; Psort location: Cytoplasmic, score: 8.96.
  
 
   0.558
EKX97328.1
KEGG: fps:FP2422 3.3e-27 nucA; DNA/RNA non-specific endonuclease; Psort location: Extracellular, score: 9.72.
 
     0.551
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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