STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX97108.1Putative alpha-1,2-mannosidase; KEGG: xca:xccb100_1258 4.0e-102 exported alpha-mannosidase; Psort location: Periplasmic, score: 9.84. (754 aa)    
Predicted Functional Partners:
EKX97106.1
Putative alpha-1,2-mannosidase; KEGG: xca:xccb100_1258 9.9e-46 exported alpha-mannosidase.
 
    
0.686
EKX97107.1
F5/8 type C domain protein; KEGG: llk:LLKF_1605 1.4e-12 ypcCD; endo-beta-N-acetylglucosaminidase.
       0.648
EKX97109.1
TonB-dependent receptor plug domain protein; KEGG: ccv:CCV52592_1977 7.7e-06 sulfate/thiosulfate import ATP-binding protein CysA 2 (sulfate-transporting ATPase 2); Psort location: OuterMembrane, score: 9.52.
       0.548
EKX97110.1
SusD family protein.
       0.518
EKX97105.1
Hypothetical protein.
       0.457
EKX97111.1
Hypothetical protein.
       0.439
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.