Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX96959.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96; Belongs to the Fur family. (142 aa)    
Predicted Functional Partners:
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.602
EKX96958.1
Histidine acid phosphatase; KEGG: dre:561891 1.1e-08 minpp1a, MGC153026, zgc:153026; multiple inositol polyphosphate histidine phosphatase, 1a.
       0.600
EKX96232.1
Cadmium-exporting ATPase; KEGG: bfs:BF1283 6.2e-168 putative transmembrane cation transport P type ATPase; K01534 Cd2+/Zn2+-exporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.561
EKY03892.1
Hypothetical protein; KEGG: tte:TTE1510 7.1e-05 rpoZ; DNA-directed RNA polymerase subunit omega K03060.
  
   0.484
EKX96879.1
FeoA domain protein; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.483
EKY03938.1
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
  
 0.477
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.469
EKY00729.1
Hypothetical protein.
  
     0.456
EKX96960.1
Xanthine permease; KEGG: apb:SAR116_1372 3.0e-65 xanthine/uracil permease, putative K03458; Psort location: CytoplasmicMembrane, score: 10.00.
       0.436
rpoC
DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.431
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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