Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EKX96969.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.86. (244 aa)    
Predicted Functional Partners:
EKX96968.1
KEGG: npu:Npun_F4823 1.4e-81 FeS assembly ATPase SufC K09013; Psort location: Cytoplasmic, score: 9.97.
       0.756
EKX96967.1
FeS assembly protein SufD; KEGG: apb:SAR116_0016 3.6e-30 SufD, needed for FhuF Fe-S center production/stability K09015; Psort location: Cytoplasmic, score: 8.96.
       0.743
EKX96970.1
KEGG: apb:SAR116_0014 3.5e-181 FeS assembly protein SufB K09014.
       0.714
EKX96966.1
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
       0.704
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.589
EKX96964.1
HTH domain protein; Psort location: Cytoplasmic, score: 8.96.
       0.414
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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