tatC protein (Prevotella saccharolytica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

tatC

Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. (257 aa)

Predicted Functional Partners:

tatA

0.996

secD

0.553

EKX96911.1

0.517

EKX99281.1

0.423

EKX96908.1

0.409

Your Current Organism:

Prevotella saccharolytica

NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EKX96908.1	EKX96911.1	HMPREF9151_02325	HMPREF9151_02328	Trigger factor; KEGG: pmz:HMPREF0659_A6182 9.7e-163 tig; trigger factor K03545; Psort location: Cytoplasmic, score: 8.96.	KEGG: pmz:HMPREF0659_A6179 3.6e-298 recQ; ATP-dependent DNA helicase RecQ K03654; Psort location: Cytoplasmic, score: 9.97.	0.456
EKX96908.1	secD	HMPREF9151_02325	HMPREF9151_00957	Trigger factor; KEGG: pmz:HMPREF0659_A6182 9.7e-163 tig; trigger factor K03545; Psort location: Cytoplasmic, score: 8.96.	Export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.	0.654
EKX96908.1	tatA	HMPREF9151_02325	HMPREF9151_02329	Trigger factor; KEGG: pmz:HMPREF0659_A6182 9.7e-163 tig; trigger factor K03545; Psort location: Cytoplasmic, score: 8.96.	Twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.	0.425
EKX96908.1	tatC	HMPREF9151_02325	HMPREF9151_02330	Trigger factor; KEGG: pmz:HMPREF0659_A6182 9.7e-163 tig; trigger factor K03545; Psort location: Cytoplasmic, score: 8.96.	Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.	0.409
EKX96911.1	EKX96908.1	HMPREF9151_02328	HMPREF9151_02325	KEGG: pmz:HMPREF0659_A6179 3.6e-298 recQ; ATP-dependent DNA helicase RecQ K03654; Psort location: Cytoplasmic, score: 9.97.	Trigger factor; KEGG: pmz:HMPREF0659_A6182 9.7e-163 tig; trigger factor K03545; Psort location: Cytoplasmic, score: 8.96.	0.456
EKX96911.1	tatA	HMPREF9151_02328	HMPREF9151_02329	KEGG: pmz:HMPREF0659_A6179 3.6e-298 recQ; ATP-dependent DNA helicase RecQ K03654; Psort location: Cytoplasmic, score: 9.97.	Twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.	0.645
EKX96911.1	tatC	HMPREF9151_02328	HMPREF9151_02330	KEGG: pmz:HMPREF0659_A6179 3.6e-298 recQ; ATP-dependent DNA helicase RecQ K03654; Psort location: Cytoplasmic, score: 9.97.	Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.	0.517
EKX99281.1	tatC	HMPREF9151_01764	HMPREF9151_02330	YihY family protein; KEGG: fnu:FN1154 4.8e-42 ribonuclease BN K07058; Psort location: CytoplasmicMembrane, score: 10.00.	Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.	0.423
secD	EKX96908.1	HMPREF9151_00957	HMPREF9151_02325	Export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.	Trigger factor; KEGG: pmz:HMPREF0659_A6182 9.7e-163 tig; trigger factor K03545; Psort location: Cytoplasmic, score: 8.96.	0.654
secD	tatA	HMPREF9151_00957	HMPREF9151_02329	Export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.	Twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.	0.560
secD	tatC	HMPREF9151_00957	HMPREF9151_02330	Export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.	Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.	0.553
tatA	EKX96908.1	HMPREF9151_02329	HMPREF9151_02325	Twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.	Trigger factor; KEGG: pmz:HMPREF0659_A6182 9.7e-163 tig; trigger factor K03545; Psort location: Cytoplasmic, score: 8.96.	0.425
tatA	EKX96911.1	HMPREF9151_02329	HMPREF9151_02328	Twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.	KEGG: pmz:HMPREF0659_A6179 3.6e-298 recQ; ATP-dependent DNA helicase RecQ K03654; Psort location: Cytoplasmic, score: 9.97.	0.645
tatA	secD	HMPREF9151_02329	HMPREF9151_00957	Twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.	Export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.	0.560
tatA	tatC	HMPREF9151_02329	HMPREF9151_02330	Twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.	Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.	0.996
tatC	EKX96908.1	HMPREF9151_02330	HMPREF9151_02325	Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.	Trigger factor; KEGG: pmz:HMPREF0659_A6182 9.7e-163 tig; trigger factor K03545; Psort location: Cytoplasmic, score: 8.96.	0.409
tatC	EKX96911.1	HMPREF9151_02330	HMPREF9151_02328	Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.	KEGG: pmz:HMPREF0659_A6179 3.6e-298 recQ; ATP-dependent DNA helicase RecQ K03654; Psort location: Cytoplasmic, score: 9.97.	0.517
tatC	EKX99281.1	HMPREF9151_02330	HMPREF9151_01764	Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.	YihY family protein; KEGG: fnu:FN1154 4.8e-42 ribonuclease BN K07058; Psort location: CytoplasmicMembrane, score: 10.00.	0.423
tatC	secD	HMPREF9151_02330	HMPREF9151_00957	Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.	Export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.	0.553
tatC	tatA	HMPREF9151_02330	HMPREF9151_02329	Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.	Twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.	0.996

Server load: medium (50%) [HD]

Permalink

Network

Neighborhood

Experiments

Co-occurrence

Databases

Co-expression

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About