Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX96915.1PepSY domain protein; Psort location: CytoplasmicMembrane, score: 10.00. (495 aa)    
Predicted Functional Partners:
EKX99753.1
Hypothetical protein; KEGG: mfs:MFS40622_0438 6.7e-06 phosphoadenosine phosphosulfate reductase; K00390 phosphoadenosine phosphosulfate reductase; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.645
EKY00518.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.605
EKX96110.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.576
EKX99756.1
RecF/RecN/SMC protein; KEGG: fnu:FN0522 7.9e-16 exonuclease SBCC K03546; Psort location: Cytoplasmic, score: 8.96.
  
     0.553
EKX96914.1
PAP2 family protein; KEGG: hac:Hac_1687 0.0057 lipid A 1-phosphatase; K12977 lipid A 1-phosphatase; Psort location: CytoplasmicMembrane, score: 9.82.
       0.532
EKX99530.1
Hypothetical protein.
  
     0.509
EKX99752.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.483
EKY02937.1
OmpA family protein; KEGG: apb:SAR116_2300 3.3e-09 peptidoglycan-associated lipoprotein K03640; Psort location: OuterMembrane, score: 9.93.
  
     0.463
EKY03132.1
Hypothetical protein.
  
     0.457
EKX99567.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.457
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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