Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EKX96701.1Sigma factor regulatory protein, FecR/PupR family; Psort location: CytoplasmicMembrane, score: 7.88. (310 aa)    
Predicted Functional Partners:
EKX96702.1
TonB-dependent receptor plug domain protein; KEGG: ccv:CCV52592_1977 1.0e-05 sulfate/thiosulfate import ATP-binding protein CysA 2 (sulfate-transporting ATPase 2).
 
    0.903
EKX96703.1
TonB-dependent receptor.
 
    0.880
EKX96704.1
SusD family protein.
 
     0.860
EKY04320.1
KEGG: bmn:BMA10247_0395 3.0e-10 RNA polymerase factor sigma-70 K03088; Belongs to the sigma-70 factor family. ECF subfamily.
  
   0.763
EKX96705.1
Endonuclease/exonuclease/phosphatase family protein; KEGG: bme:BMEII0240 0.00021 dioxygenase K06896.
 
     0.626
EKX96709.1
Sigma-70 region 2; KEGG: chu:CHU_3562 1.9e-08 rpoE; ECF subfamily RNA polymerase sigma factor K03088; Psort location: Cytoplasmic, score: 8.96; Belongs to the sigma-70 factor family. ECF subfamily.
 
   0.592
EKY03677.1
Hypothetical protein.
  
 
 0.583
EKY02991.1
RNA polymerase sigma-70 factor; KEGG: chu:CHU_3562 1.1e-14 rpoE; ECF subfamily RNA polymerase sigma factor K03088; Psort location: Cytoplasmic, score: 9.97; Belongs to the sigma-70 factor family. ECF subfamily.
  
   0.548
EKX96700.1
Arylsulfatase; KEGG: vfi:VF_0137 2.6e-82 choline-sulfatase K07014; Psort location: CytoplasmicMembrane, score: 10.00.
       0.542
EKX97110.1
SusD family protein.
  
     0.526
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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