STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX96668.1Methyltransferase family; KEGG: tva:TVAG_222490 8.7e-43 O-methyltransferase N-terminus family protein; K00599; Psort location: Cytoplasmic, score: 9.97. (275 aa)    
Predicted Functional Partners:
EKX96667.1
Hypothetical protein.
       0.558
EKX96669.1
Hypothetical protein.
       0.467
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
     
 0.434
EKX99124.1
M6 family metalloprotease domain protein; KEGG: pin:Ping_2144 1.2e-10 peptidase M6, immune inhibitor A; K09607 immune inhibitor A.
  
     0.421
EKX96670.1
ABC transporter, ATP-binding protein; KEGG: pmz:HMPREF0659_A6183 1.9e-109 lptB; lipopolysaccharide ABC transporter, ATP-binding protein LptB K06861; Psort location: Cytoplasmic, score: 9.12.
       0.414
EKY01426.1
Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 8.96.
 
     0.413
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.