Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
EKX96669.1Hypothetical protein. (251 aa)    
Predicted Functional Partners:
EKX96670.1
ABC transporter, ATP-binding protein; KEGG: pmz:HMPREF0659_A6183 1.9e-109 lptB; lipopolysaccharide ABC transporter, ATP-binding protein LptB K06861; Psort location: Cytoplasmic, score: 9.12.
       0.671
EKX96668.1
Methyltransferase family; KEGG: tva:TVAG_222490 8.7e-43 O-methyltransferase N-terminus family protein; K00599; Psort location: Cytoplasmic, score: 9.97.
       0.467
EKX96671.1
Hypothetical protein; KEGG: apb:SAR116_0647 1.2e-22 ABC-type transport system involved in resistance to organic solvents K02066; Psort location: CytoplasmicMembrane, score: 10.00.
       0.445
EKX96672.1
ABC transporter, ATP-binding protein; KEGG: rru:Rru_A2909 3.3e-43 ABC transporter component K02065; Psort location: CytoplasmicMembrane, score: 7.88.
       0.437
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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