STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX96674.1Putative endoribonuclease L-PSP; KEGG: ape:APE_1501.1 2.3e-28 ribonuclease UK114 K01175; Psort location: Cytoplasmic, score: 9.26. (127 aa)    
Predicted Functional Partners:
apt
Putative adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
 
    0.737
EKY03094.1
KEGG: pmz:HMPREF0659_A6597 0. putative translation elongation factor G; K02355 elongation factor EF-G; Psort location: Cytoplasmic, score: 9.97.
    
  0.683
fusA
Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]
    
  0.683
EKX96673.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.675
tpiA
Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
 
 0.579
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
  
 
 0.490
EKX99747.1
Hypothetical protein; KEGG: clj:CLJU_c23150 9.6e-21 nicotinamidase K08281; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.470
EKX96158.1
Hypothetical protein; KEGG: rha:RHA1_ro02663 0.00066 triacylglycerol lipase K01046.
  
 
 0.465
EKY03451.1
KEGG: pru:PRU_0166 4.1e-155 ilvE; branched-chain-amino-acid transaminase K00826; Psort location: Cytoplasmic, score: 9.26.
    
 0.461
EKY00737.1
Prenyltransferase, UbiA family; KEGG: clj:CLJU_c13310 1.8e-44 ubiA; putative 4-hydroxybenzoate polyprenyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
    
  0.416
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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