Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EKX96568.1Hypothetical protein. (48 aa)    
Predicted Functional Partners:
EKX96566.1
Hypothetical protein; KEGG: eca:ECA2408 2.3e-35 paeX; pectin acetylesterase K05968.
       0.572
EKX96567.1
FAD dependent oxidoreductase; KEGG: fjo:Fjoh_1077 1.7e-76 all-trans-retinol 13,14-reductase K09516; overlaps another CDS with the same product name.
       0.572
EKX96569.1
FAD dependent oxidoreductase; KEGG: cpi:Cpin_1874 2.2e-85 All-trans-retinol 13,14-reductase K09516; Psort location: Cytoplasmic, score: 8.96; overlaps another CDS with the same product name.
       0.572
dinB
Putative DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.
       0.558
EKX96565.1
Hypothetical protein; KEGG: bvu:BVU_1033 1.0e-133 coenzyme F390 synthetase; K01912 phenylacetate-CoA ligase; Psort location: Cytoplasmic, score: 8.96.
       0.502
EKX96563.1
Acyltransferase; KEGG: fps:FP2256 5.3e-123 bifunctional exporter/1-acyl-sn-glycerol-3-phosphate acyltransferase precursor; Psort location: CytoplasmicMembrane, score: 10.00.
       0.487
EKX96564.1
Acyltransferase family protein; KEGG: gfo:GFO_0085 1.1e-56 hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.487
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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