STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX96554.1Hypothetical protein; KEGG: dfe:Dfer_0792 0.0011 histidine kinase. (670 aa)    
Predicted Functional Partners:
EKX96553.1
KEGG: pyo:PY02151 0.0087 hypothetical protein; K07151 dolichyl-diphosphooligosaccharide--protein glycosyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.825
EKX96555.1
Non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
       0.825
EKY02955.1
Outer membrane insertion signal domain protein.
  
     0.774
EKX96859.1
Hypothetical protein.
  
     0.774
EKY02842.1
TonB-dependent receptor.
  
     0.770
EKY03075.1
Hypothetical protein; Psort location: Extracellular, score: 9.64.
  
     0.769
EKX99567.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.753
EKY03263.1
Tetratricopeptide repeat protein.
  
     0.748
EKX99555.1
Hypothetical protein.
  
     0.745
EKX96858.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
  
     0.743
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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