STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX96444.1KEGG: srm:SRM_02163 1.6e-75 GH3; GH3 auxin-responsive promoter superfamily; Psort location: Cytoplasmic, score: 8.96. (502 aa)    
Predicted Functional Partners:
EKY03892.1
Hypothetical protein; KEGG: tte:TTE1510 7.1e-05 rpoZ; DNA-directed RNA polymerase subunit omega K03060.
 
     0.676
EKY00512.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.672
EKY00546.1
uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
  
     0.661
EKX99536.1
KEGG: abu:Abu_1717 0.00065 hsdM; type I restriction-modification system, M subunit, putative.
  
     0.582
EKX96865.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.533
EKY01487.1
Hypothetical protein; KEGG: cwo:Cwoe_1613 7.1e-09 phosphatidylinositol alpha-mannosyltransferase K08256; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.507
EKY01584.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.493
EKY02042.1
Hypothetical protein.
  
     0.479
EKY04287.1
Hypothetical protein.
  
     0.456
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
       0.447
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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