STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX96451.1Polyprenyl synthetase; KEGG: pmz:HMPREF0659_A5037 5.7e-110 polyprenyl synthetase; K02523 octaprenyl diphosphate synthase; Psort location: Cytoplasmic, score: 9.97. (325 aa)    
Predicted Functional Partners:
EKY00008.1
Di-trans,poly-cis-decaprenylcistransferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
 
 0.945
EKY02957.1
Polyprenyl synthetase; KEGG: pmz:HMPREF0659_A7168 5.1e-118 polyprenyl synthetase; K13789 geranylgeranyl diphosphate synthase, type II; Psort location: Cytoplasmic, score: 9.26.
  
  
 
0.871
menA
1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.
    
 0.851
menG
Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
  
 0.756
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.697
EKY03919.1
Methyltransferase domain protein; KEGG: rha:RHA1_ro03827 1.4e-10 ubiquinone/menaquinone methyltransferase K03183; Psort location: Cytoplasmic, score: 8.96.
   
 0.556
EKY01430.1
Methyltransferase domain protein; KEGG: ssa:SSA_1664 1.2e-75 phosphatidylethanolamine N-methyltransferase, putative; Psort location: Cytoplasmic, score: 8.96.
   
 0.556
EKX96457.1
Methyltransferase domain protein; KEGG: mul:MUL_3266 9.0e-57 methyltransferase; K00599; Psort location: Cytoplasmic, score: 8.96.
   
 0.556
EKY02978.1
KEGG: apb:SAR116_1869 2.6e-34 electron transfer flavoprotein alpha-subunit K03522; Psort location: Cytoplasmic, score: 8.96.
   
   0.519
EKY01619.1
Hypothetical protein; KEGG: jan:Jann_3447 0.0031 sarcosine oxidase alpha subunit family protein; K00302 sarcosine oxidase, subunit alpha; Psort location: Cytoplasmic, score: 8.96.
  
 0.448
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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