STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX96454.1Hypothetical protein; KEGG: ddd:Dda3937_01044 1.3e-05 putative periplasmic protein. (462 aa)    
Predicted Functional Partners:
EKX96453.1
Alginate O-acetyltransferase AlgI family protein; KEGG: scl:sce8408 7.1e-96 algI; membrane-bound polysaccharide acetyltransferase; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the membrane-bound acyltransferase family.
 
 
  0.964
EKY03579.1
Glycosyl hydrolase family 2, sugar binding domain protein.
   
 0.701
EKX96455.1
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate.
       0.631
EKX96452.1
Hypothetical protein.
       0.550
EKX96148.1
Heparinase II/III-like protein.
   
 0.521
EKX96456.1
MazG nucleotide pyrophosphohydrolase domain protein; KEGG: bbl:BLBBGE_405 2.3e-26 nucleoside-triphosphate diphosphatase; Psort location: Cytoplasmic, score: 8.96.
       0.453
EKX96457.1
Methyltransferase domain protein; KEGG: mul:MUL_3266 9.0e-57 methyltransferase; K00599; Psort location: Cytoplasmic, score: 8.96.
       0.438
dtd
D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.
       0.401
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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