STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX96228.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (354 aa)    
Predicted Functional Partners:
EKX99215.1
Tetratricopeptide repeat protein; KEGG: tet:TTHERM_01109810 9.9e-07 Tubulin-tyrosine ligase family protein.
  
     0.496
EKX98755.1
Hypothetical protein.
  
     0.482
EKY00979.1
BNR/Asp-box repeat protein; KEGG: sus:Acid_0193 0.00018 exo-alpha-sialidase K01186.
  
     0.481
EKX96229.1
TonB-dependent receptor.
       0.432
EKX98754.1
Hypothetical protein.
  
     0.416
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.