Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
EKX96121.1NAD dependent epimerase/dehydratase family protein; KEGG: abi:Aboo_0256 2.0e-25 dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase; Psort location: Cytoplasmic, score: 8.96. (328 aa)    
Predicted Functional Partners:
EKY02691.1
KEGG: pmz:HMPREF0659_A6853 1.3e-176 rfbB; dTDP-glucose 4,6-dehydratase K01710; Psort location: Cytoplasmic, score: 9.97; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.895
EKX96118.1
Phosphoenolpyruvate mutase; KEGG: bfs:BF1897 9.9e-177 aepX; putative LPS biosynthesis related phosphoenolpyruvate phosphomutase; K01841 phosphoenolpyruvate phosphomutase; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.864
EKX96117.1
KEGG: fsu:Fisuc_0992 7.7e-122 phosphonopyruvate decarboxylase; K09459 phosphonopyruvate decarboxylase; Psort location: Cytoplasmic, score: 8.96.
 
 
   0.821
EKY02358.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
 0.795
EKX96122.1
Phosphodiesterase family protein; KEGG: cpo:COPRO5265_1320 6.8e-20 serine/threonine protein phosphatase.
 
     0.792
EKX96119.1
Hypothetical protein.
       0.773
EKX96120.1
Hypothetical protein; KEGG: smb:smi_1224 2.6e-05 licC; CTP:phosphocholine cytidylyltransferase; Psort location: Cytoplasmic, score: 8.96.
       0.773
EKY00064.1
Nucleotide sugar dehydrogenase; KEGG: pru:PRU_1313 1.2e-189 UDP-glucose 6-dehydrogenase K00012.
 
 0.744
rpsS
Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
   
  0.732
rpsC
Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
   
  0.726
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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