STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX96124.1LICD family protein; KEGG: sjj:SPJ_1187 4.0e-31 phosphotransferase; K07271 lipopolysaccharide cholinephosphotransferase. (258 aa)    
Predicted Functional Partners:
EKX96123.1
Polysaccharide biosynthesis protein; KEGG: cco:CCC13826_0528 9.4e-08 cytosol aminopeptidase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
EKX96118.1
Phosphoenolpyruvate mutase; KEGG: bfs:BF1897 9.9e-177 aepX; putative LPS biosynthesis related phosphoenolpyruvate phosphomutase; K01841 phosphoenolpyruvate phosphomutase; Psort location: Cytoplasmic, score: 9.97.
 
     0.713
EKX96117.1
KEGG: fsu:Fisuc_0992 7.7e-122 phosphonopyruvate decarboxylase; K09459 phosphonopyruvate decarboxylase; Psort location: Cytoplasmic, score: 8.96.
 
     0.708
EKX96122.1
Phosphodiesterase family protein; KEGG: cpo:COPRO5265_1320 6.8e-20 serine/threonine protein phosphatase.
       0.682
EKX96121.1
NAD dependent epimerase/dehydratase family protein; KEGG: abi:Aboo_0256 2.0e-25 dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase; Psort location: Cytoplasmic, score: 8.96.
 
     0.658
EKX96120.1
Hypothetical protein; KEGG: smb:smi_1224 2.6e-05 licC; CTP:phosphocholine cytidylyltransferase; Psort location: Cytoplasmic, score: 8.96.
       0.606
EKX96119.1
Hypothetical protein.
       0.600
EKX96116.1
KEGG: hsm:HSM_0545 1.2e-27 LicD family protein; K07271 lipopolysaccharide cholinephosphotransferase; Psort location: Cytoplasmic, score: 8.96.
 
    
0.585
EKY03622.1
LICD family protein; KEGG: lbu:LBUL_1801 1.6e-43 LPS biosynthesis protein; K07271 lipopolysaccharide cholinephosphotransferase; Psort location: Cytoplasmic, score: 8.96.
  
  
 
0.552
EKX99744.1
Hypothetical protein.
  
     0.492
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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