Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKX96140.1KEGG: pmz:HMPREF0659_A5142 3.6e-140 glycosyltransferase, group 1 family protein. (424 aa)    
Predicted Functional Partners:
EKX96141.1
KEGG: pmz:HMPREF0659_A5141 4.6e-85 glycosyltransferase, group 2 family protein; Psort location: Cytoplasmic, score: 8.96.
 
    0.884
EKX98600.1
KEGG: pmz:HMPREF0659_A6687 0. alpha amylase, catalytic domain protein; K00700 1,4-alpha-glucan branching enzyme; Psort location: Cytoplasmic, score: 9.97.
   
  0.618
EKX96139.1
Hypothetical protein.
       0.561
EKX99666.1
Glycosyltransferase, group 2 family protein; KEGG: hac:Hac_1461 6.6e-61 wbyL; glycosyl transferase; Psort location: CytoplasmicMembrane, score: 9.82.
    0.528
EKX99330.1
KEGG: pmz:HMPREF0659_A6343 0. glgP; alpha-glucan phosphorylase K00688; Psort location: Cytoplasmic, score: 9.97.
   
  0.507
EKY02012.1
Hypothetical protein.
  
     0.497
EKX96942.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
    0.453
EKX99583.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.444
EKX99664.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
    0.435
EKY02982.1
Chain length determinant protein; KEGG: pgi:PG0436 1.1e-108 capsular polysaccharide transport protein, putative; K00903 protein-tyrosine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.409
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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